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Publication : - Siebor,E. and Neuwirth,C., "Emergence of Salmonella genomic island 1 (SGI1) among Proteus mirabilis clinical isolates in Dijon, France", J. Antimicrob. Chemother. 68 (8), 1750-1756 (2013) PUBMED 23580563. - Siebor,E. and Neuwirth,C., "Direct Submission", Submitted (23-MAY-2012) Bacteriology, Laboratory of Bacteriology University Hospital Dijon, Rue Angelique Ducoudray, Dijon 21070, France. |
No | Name | GenBank Accn | Position | Size(bp) | Strand | Resistance/Virulence | Description |
1 | thdF | AGK06942.1 | 1-468 | 468 | + | Not tested | - |
2 | repeat | - | 451-468 | 18 | + | Not tested | /rpt_type=direct /rpt_family="DR-L; perfect repeat left end of SGI1; recombination site recognized by SGI1 Int; similar to DR-R |
3 | int | AGK06943.1 | 672-1889 | 1218 | + | Not tested | - |
4 | xis | AGK06944.1 | 1886-2254 | 369 | - | Not tested | - |
5 | rep | AGK06945.1 | 2612-3565 | 954 | - | Not tested | - |
6 | S004 | AGK06946.1 | 3552-3842 | 291 | - | Not tested | - |
7 | pseudo | - | 3930-5645 | 1716 | - | Not tested | - |
8 | repeat | - | 5646-5681 | 36 | - | Not tested | /rpt_type=inverted /rpt_family="right inverted repeat (IRr) of IS1359 |
9 | overlap with orfA characteristic of IS3 family members | AGK06947.1 | 5654-6526 | 873 | - | Not tested | - |
10 | unnamed | AGK06948.1 | 6523-6867 | 345 | - | Not tested | - |
11 | repeat | - | 6868-6903 | 36 | - | Not tested | /rpt_type=inverted /rpt_family="left inverted repeat (IRl) of IS1359 |
12 | pseudo | - | 6904-7098 | 195 | + | Not tested | - |
13 | S010 | AGK06949.1 | 7118-7372 | 255 | - | Not tested | - |
14 | S011 | AGK06950.1 | 7372-10776 | 3405 | - | Not tested | - |
15 | S012 | AGK06951.1 | 10780-12204 | 1425 | - | Not tested | - |
16 | S013 | AGK06952.1 | 12448-13305 | 858 | + | Not tested | - |
17 | S014 | AGK06953.1 | 13302-13697 | 396 | + | Not tested | - |
18 | S015 | AGK06954.1 | 14112-14381 | 270 | - | Not tested | - |
19 | S016 | AGK06955.1 | 14459-14644 | 186 | - | Not tested | - |
20 | S017 | AGK06956.1 | 14504-14758 | 255 | + | Not tested | - |
21 | S018 | AGK06957.1 | 14655-14972 | 318 | - | Not tested | - |
22 | S019 | AGK06958.1 | 15230-15526 | 297 | - | Not tested | - |
23 | S020 | AGK06959.1 | 15530-16495 | 966 | - | Not tested | - |
24 | S021 | AGK06960.1 | 16588-16923 | 336 | + | Not tested | - |
25 | S022 | AGK06961.1 | 16835-17110 | 276 | - | Not tested | - |
26 | S023 | AGK06962.1 | 17471-19111 | 1641 | - | Not tested | - |
27 | S024 | AGK06963.1 | 19129-21054 | 1926 | - | Not tested | - |
28 | S025 | AGK06964.1 | 21132-23675 | 2544 | - | Not tested | - |
29 | S026 | AGK06965.1 | 23696-24685 | 990 | - | Not tested | - |
30 | res | AGK06966.1 | 24764-25348 | 585 | - | Not tested | - |
31 | repeat | - | 25415-25419 | 5 | + | Not tested | /rpt_type=direct /rpt_family="5 bp duplication generated by insertion of In4-type class 1 integron |
32 | repeat | - | 25420-41051 | 15632 | + | Not tested | /mobile_element_type="integron:InPmSCO |
33 | repeat | - | 25420-25444 | 25 | + | Not tested | /rpt_type=inverted /rpt_family="left hand inverted repeat of class 1 integron; IRi |
34 | intI1 | AGK06967.1 | 25622-26635 | 1014 | - | Not tested | - |
35 | promoter | - | 26520-26548 | 29 | + | Not tested | - |
36 | aacCA5 | AGK06968.1 | 26793-27269 | 477 | + | Resistance | - |
37 | aadA7 | AGK06969.1 | 27345-28142 | 798 | + | Resistance | - |
38 | qacEdelta1 | AGK06970.1 | 28306-28653 | 348 | + | Resistance | - |
39 | sul1 delta | AGK06971.1 | 28647-29618 | 972 | + | Resistance | - |
40 | repeat | - | 29503-29605 | 103 | + | Not tested | /rpt_type=direct /rpt_family="floDR-L; imperfect repeat similar to floDR-R |
41 | floRc | AGK06972.1 | 29835-31049 | 1215 | + | Resistance | - |
42 | repeat | - | 31144-31246 | 103 | + | Not tested | /rpt_type=direct /rpt_family="floDR-R; imperfect repeat similar to floDR-L |
43 | tetR(G) | AGK06973.1 | 31256-31882 | 627 | - | Resistance | - |
44 | tetA(G) | AGK06974.1 | 32034-33161 | 1128 | + | Resistance | - |
45 | unnamed | AGK06975.1 | 33182-33973 | 792 | + | Not tested | - |
46 | rcr3 | AGK06976.1 | 34065-35549 | 1485 | - | Not tested | - |
47 | groEL/intI1 | AGK06977.1 | 35824-36477 | 654 | - | Not tested | - |
48 | promoter | - | 36362-36390 | 29 | + | Not tested | - |
49 | pse-1 | AGK06978.1 | 36683-37549 | 867 | + | Resistance | - |
50 | qacEdelta1 | AGK06979.1 | 37766-38113 | 348 | + | Resistance | - |
51 | sul1 | AGK06980.1 | 38107-38946 | 840 | + | Resistance | - |
52 | unnamed | AGK06981.1 | 39074-39574 | 501 | + | Resistance | - |
53 | unnamed | AGK06982.1 | 39598-39885 | 288 | + | Not tested | - |
54 | repeat | - | 39897-39921 | 25 | - | Not tested | /rpt_type=inverted /rpt_family="internal additional copy of IRt |
55 | repeat | - | 40020-40033 | 14 | + | Not tested | /rpt_type=inverted /rpt_family="IRl of IS6100 |
56 | tnpA6100 | AGK06983.1 | 40051-40845 | 795 | + | Not tested | - |
57 | repeat | - | 40886-40899 | 14 | + | Not tested | /rpt_type=inverted /rpt_family="IRr of IS6100 |
58 | repeat | - | 41027-41051 | 25 | + | Not tested | /rpt_type=inverted /rpt_family="right hand inverted repeat of class 1 integron; IRt |
59 | repeat | - | 41052-41056 | 5 | + | Not tested | /rpt_type=direct /rpt_family="5 bp duplication generated by insertion of In4-type class 1 integron |
60 | S044 | AGK06984.1 | 41193-41822 | 630 | + | Not tested | - |
61 | repeat | - | 41932-41949 | 18 | + | Not tested | /rpt_type=direct /rpt_family="'DR-R, perfect repeat right end of SGI1, chromosomal site recognized by SGI1 Int; similar to DR-L' |
62 | repeat | - | 41959-42007 | 49 | + | Not tested | /rpt_type=direct /rpt_family="49-bp perfect direct repeat from the hipBA module |
63 | hipB | AGK06985.1 | 42098-42355 | 258 | + | Not tested | - |
64 | hipA | AGK06986.1 | 42356-43669 | 1314 | + | Not tested | - |
65 | repeat | - | 43673-43721 | 49 | + | Not tested | /rpt_type=direct /rpt_family="49-bp perfect direct repeat from the hipBA module |
66 | PMI3124 | AGK06987.1 | 44072-44504 | 433 | + | Not tested | - |
NC_017162 (Acinetobacter baumannii 1656-2): 1.2 Mb NC_017847 (Acinetobacter baumannii MDR-TJ): 1.4 Mb NC_018706 (Acinetobacter baumannii TYTH-1): 2.8 Mb NC_002935 (Corynebacterium diphtheriae NCTC13129): 2.0 Mb NC_014836 (Desulfurispirillum indicum S5): 0.0 Mb NC_018106 (Klebsiella oxytoca E718): 2.0 Mb NC_017549 (Pseudomonas aeruginosa NCGM2.S1): 1.9 Mb NC_009656 (Pseudomonas aeruginosa PA7): 5.5 Mb NC_011083 (Salmonella enterica SL476): 1.5 Mb |