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Publication : - Siebor,E. and Neuwirth,C., "Emergence of Salmonella genomic island 1 (SGI1) among Proteus mirabilis clinical isolates in Dijon, France", J. Antimicrob. Chemother. 68 (8), 1750-1756 (2013) PUBMED 23580563. - Siebor,E. and Neuwirth,C., "Direct Submission", Submitted (23-MAY-2012) Bacteriology, Laboratory of Bacteriology University Hospital Dijon, Rue Angelique Ducoudray, Dijon 21070, France. |
No | Name | GenBank Accn | Position | Size(bp) | Strand | Resistance/Virulence | Description |
1 | thdF | AGK06905.1 | 1-468 | 468 | + | Not tested | - |
2 | repeat | - | 451-468 | 18 | + | Not tested | /rpt_type=direct /rpt_family="DR-L; perfect repeat left end of SGI1; recombination site recognized by SGI1 Int; similar to DR-R |
3 | int | AGK06906.1 | 672-1889 | 1218 | + | Not tested | - |
4 | xis | AGK06907.1 | 1886-2254 | 369 | - | Not tested | - |
5 | rep | AGK06908.1 | 2612-3565 | 954 | - | Not tested | - |
6 | S004 | AGK06909.1 | 3552-3842 | 291 | - | Not tested | - |
7 | pseudo | - | 3930-5645 | 1716 | - | Not tested | - |
8 | repeat | - | 5646-5681 | 36 | - | Not tested | /rpt_type=inverted /rpt_family="right inverted repeat (IRr) of IS1359 |
9 | orfB | AGK06910.1 | 5654-6526 | 873 | - | Not tested | - |
10 | orfA | AGK06911.1 | 6523-6867 | 345 | - | Not tested | - |
11 | repeat | - | 6868-6903 | 36 | - | Not tested | /rpt_type=inverted /rpt_family="left inverted repeat (IRl) of IS1359 |
12 | pseudo | - | 6904-7098 | 195 | + | Not tested | - |
13 | S010 | AGK06912.1 | 7118-7372 | 255 | - | Not tested | - |
14 | S011 | AGK06913.1 | 7372-10776 | 3405 | - | Not tested | - |
15 | S012 | AGK06914.1 | 10780-12204 | 1425 | - | Not tested | - |
16 | S013 | AGK06915.1 | 12448-13305 | 858 | + | Not tested | - |
17 | S014 | AGK06916.1 | 13302-13697 | 396 | + | Not tested | - |
18 | S015 | AGK06917.1 | 14112-14381 | 270 | - | Not tested | - |
19 | S016 | AGK06918.1 | 14459-14644 | 186 | - | Not tested | - |
20 | S017 | AGK06919.1 | 14504-14758 | 255 | + | Not tested | - |
21 | S018 | AGK06920.1 | 14655-14972 | 318 | - | Not tested | - |
22 | S019 | AGK06921.1 | 15230-15526 | 297 | - | Not tested | - |
23 | S020 | AGK06922.1 | 15530-16495 | 966 | - | Not tested | - |
24 | S021 | AGK06923.1 | 16588-16923 | 336 | + | Not tested | - |
25 | S022 | AGK06924.1 | 16835-17110 | 276 | - | Not tested | - |
26 | S023 | AGK06925.1 | 17471-19111 | 1641 | - | Not tested | - |
27 | S024 | AGK06926.1 | 19129-21054 | 1926 | - | Not tested | - |
28 | S025 | AGK06927.1 | 21132-23675 | 2544 | - | Not tested | - |
29 | S026 | AGK06928.1 | 23696-24685 | 990 | - | Not tested | - |
30 | res | AGK06929.1 | 24764-25348 | 585 | - | Not tested | - |
31 | repeat | - | 25415-25419 | 5 | + | Not tested | /rpt_type=direct /rpt_family="5 bp duplication generated by insertion of In4-type class 1 integron |
32 | repeat | - | 25420-31591 | 6172 | + | Not tested | /mobile_element_type="integron:InPmABB |
33 | repeat | - | 25420-25444 | 25 | + | Not tested | /rpt_type=inverted /rpt_family="left hand inverted repeat of class 1 integron; IRi |
34 | intI1 | AGK06930.1 | 25622-26635 | 1014 | - | Not tested | - |
35 | promoter | - | 26520-26548 | 29 | + | Not tested | - |
36 | aacCA5 | AGK06931.1 | 26793-27269 | 477 | + | Resistance | - |
37 | aadA7 | AGK06932.1 | 27345-28142 | 798 | + | Resistance | - |
38 | qacEdelta1 | AGK06933.1 | 28306-28653 | 348 | + | Resistance | - |
39 | sul1 | AGK06934.1 | 28647-29486 | 840 | + | Resistance | - |
40 | orf5 | AGK06935.1 | 29614-30114 | 501 | + | Resistance | - |
41 | orf6 | AGK06936.1 | 30138-30425 | 288 | + | Not tested | - |
42 | repeat | - | 30437-30461 | 25 | - | Not tested | /rpt_type=inverted /rpt_family="internal additional copy of IRt |
43 | repeat | - | 30560-30573 | 14 | + | Not tested | /rpt_type=inverted /rpt_family="IRl of IS6100 |
44 | tnpA6100 | AGK06937.1 | 30591-31385 | 795 | + | Not tested | - |
45 | repeat | - | 31426-31439 | 14 | + | Not tested | /rpt_type=inverted /rpt_family="IRr of IS6100 |
46 | repeat | - | 31567-31591 | 25 | + | Not tested | /rpt_type=inverted /rpt_family="right hand inverted repeat of class 1 integron; IRt |
47 | repeat | - | 31592-31596 | 5 | + | Not tested | /rpt_type=direct /rpt_family="5 bp duplication generated by insertion of In4-type class 1 integron |
48 | S044 | AGK06938.1 | 31733-32362 | 630 | + | Not tested | - |
49 | repeat | - | 32472-32489 | 18 | + | Not tested | /rpt_type=direct /rpt_family="'DR-R, perfect repeat right end of SGI1, chromosomal site recognized by SGI1 Int; similar to DR-L' |
50 | repeat | - | 32499-32547 | 49 | + | Not tested | /rpt_type=direct /rpt_family="49-bp perfect direct repeat from the hipBA module |
51 | hipB | AGK06939.1 | 32638-32895 | 258 | + | Not tested | - |
52 | hipA | AGK06940.1 | 32896-34209 | 1314 | + | Not tested | - |
53 | repeat | - | 34213-34261 | 49 | + | Not tested | /rpt_type=direct /rpt_family="49-bp perfect direct repeat from the hipBA module |
54 | PMI3124 | AGK06941.1 | 34612-35045 | 434 | + | Not tested | - |
NC_017162 (Acinetobacter baumannii 1656-2): 1.2 Mb NC_017847 (Acinetobacter baumannii MDR-TJ): 1.4 Mb NC_018706 (Acinetobacter baumannii TYTH-1): 2.8 Mb NC_002935 (Corynebacterium diphtheriae NCTC13129): 2.0 Mb NC_014836 (Desulfurispirillum indicum S5): 0.0 Mb NC_018106 (Klebsiella oxytoca E718): 2.0 Mb NC_017549 (Pseudomonas aeruginosa NCGM2.S1): 1.9 Mb NC_009656 (Pseudomonas aeruginosa PA7): 5.5 Mb NC_011083 (Salmonella enterica SL476): 1.5 Mb |