PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Salmonella enterica Ty2 (NC_004631)
Location : 2620356 - 2687428 bp
Size : 67073 bp
GC content : 51.6 %
GC bias (=GCregion - GCgenome) : -0.45 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA NP_806267.1 2620356-2620763 408 + hypothetical protein-
2NA NP_806268.1 2621088-2621807 720 + outer membrane adhesin-
3NA NP_806269.1 2622770-2623387 618 - hypothetical protein-
4tinR NP_806270.1 2623527-2623982 456 - transcriptional regulator-
5tcfD NP_806271.1 2624115-2625194 1080 - fimbrial protein-
6tsaC NP_806272.1 2625217-2627904 2688 - outer membrane fimbrial usher protein-
7tcfB NP_806273.1 2628013-2628588 576 - fimbrial subunitVirulence
8tcfA NP_806274.1 2628639-2629349 711 - fimbrial protein-
9NA - 2630564-2630941 378 + --
10NA - 2631000-2631167 168 - --
11NA NP_806275.1 2631254-2631367 114 - hypothetical protein-
12sinR NP_806276.1 2631487-2632431 945 - LysR family transcriptional regulator-
13NA - 2632637-2632768 132 - --
14NA YP_006892445.1 2632909-2633169 261 - hypothetical protein-
15NA NP_806277.1 2633249-2634070 822 - hypothetical proteinVirulence
16safD NP_806278.1 2634478-2634948 471 - fimbrial structural subunit-
17safC NP_806279.1 2634970-2637480 2511 - outer-membrane fimbrial usher proteinVirulence
18safB NP_806280.1 2637504-2638244 741 - periplasmic fimbrial chaperone proteinVirulence
19safE - 2638319-2638817 499 - --
20safA NP_806281.1 2638950-2639444 495 - lipoprotein-
21NA - 2640200-2640904 705 - --
22NA NP_806282.1 2640957-2641262 306 + hypothetical protein-
23NA NP_806283.1 2641332-2641775 444 - hypothetical protein-
24NA NP_806284.1 2641777-2642037 261 - hypothetical protein-
25NA NP_806285.1 2642116-2644647 2532 - Rhs-family protein-
26NA NP_806286.1 2644743-2645036 294 - hypothetical protein-
27NA NP_806287.1 2645055-2645732 678 - hypothetical protein-
28NA NP_806288.1 2645735-2649799 4065 - Rhs-family protein-
29NA NP_806289.1 2649818-2650264 447 - hypothetical protein-
30NA NP_806290.1 2650288-2652477 2190 - Rhs-family protein-
31NA NP_806291.1 2652840-2652947 108 - hypothetical protein-
32NA NP_806292.1 2652955-2653392 438 - hypothetical protein-
33NA NP_806293.1 2653419-2653835 417 - hypothetical protein-
34NA NP_806294.1 2653963-2654424 462 - hypothetical protein-
35NA NP_806295.1 2654409-2654879 471 - hypothetical protein-
36NA NP_806296.1 2654922-2655689 768 - hypothetical protein-
37NA - 2655689-2659550 3862 - --
38NA NP_806297.1 2659787-2660281 495 - hypothetical protein-
39NA NP_806298.1 2660313-2661062 750 - hypothetical protein-
40NA NP_806299.1 2661067-2662368 1302 - hypothetical protein-
41NA NP_806300.1 2662365-2663708 1344 - hypothetical protein-
42NA NP_806301.1 2663712-2664248 537 - lipoprotein-
43NA NP_806302.1 2664315-2664800 486 - hypothetical proteinVirulence
44NA NP_806303.1 2665037-2665462 426 - hypothetical protein-
45NA NP_806304.1 2665434-2665835 402 - hypothetical protein-
46NA - 2665888-2667396 1509 - --
47NA NP_806305.1 2667420-2667962 543 - hypothetical proteinVirulence
48NA NP_806306.1 2668026-2668316 291 - hypothetical protein-
49NA NP_806307.1 2668319-2668417 99 - hypothetical protein-
50NA NP_806308.1 2668402-2671065 2664 - ClpB-like proteinVirulence
51NA NP_806310.1 2671433-2672335 903 + hypothetical protein-
52NA NP_806311.1 2672322-2673146 825 + hypothetical protein-
53NA NP_806312.1 2673143-2673637 495 + hypothetical protein-
54NA NP_806313.1 2673653-2675536 1884 + hypothetical proteinVirulence
55NA NP_806314.1 2675533-2676528 996 + hypothetical protein-
56NA - 2676539-2677593 1055 + --
57tRNA-Asp - 2677913-2677989 77 - tRNA-Asp-
58dnaQ NP_806317.1 2678123-2678854 732 - DNA polymerase III subunit epsilon-
59rnhA NP_806318.1 2678918-2679385 468 + ribonuclease H-
60NA NP_806319.1 2679382-2680104 723 - hypothetical protein-
61gloB NP_806320.1 2680139-2680894 756 + hydroxyacylglutathione hydrolase-
62mltD NP_806321.1 2680966-2682333 1368 + membrane-bound lytic murein transglycosylase D-
63yafE NP_806322.1 2682389-2683159 771 - methyltransferase-
64yafD NP_806323.2 2683237-2684037 801 - hypothetical protein-
65NA NP_806324.1 2684169-2685344 1176 - drug efflux protein-
66yafC NP_806325.1 2685449-2686363 915 + transcriptional regulator-
67dkgB NP_806326.1 2686384-2687187 804 - 2,5-diketo-D-gluconate reductase B-
68tRNA-Asp - 2687352-2687428 77 - tRNA-Asp-


tRNA-Asp tRNA-Asp