PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli SE11 (NC_011415)
Location : 230683 - 265321 bp
Size : 34639 bp
GC content : 51.8 %
GC bias (=GCregion - GCgenome) : 0.99 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1tRNA-Asp - 230683-230759 77 + tRNA-Asp-
2dkgB YP_002291478.1 230922-231725 804 + 2,5-diketo-D-gluconate reductase B-
3NA YP_002291479.1 231722-232636 915 - putative transcriptional regulator-
4NA YP_002291480.1 232898-233677 780 + hypothetical protein-
5NA YP_002291481.1 233755-234525 771 + putative biotin synthesis protein-
6mltD YP_002291482.1 234573-235931 1359 - membrane-bound lytic murein transglycosylase D-
7NA YP_002291483.1 236003-236758 756 - hydroxyacylglutathione hydrolase-
8NA YP_002291484.1 236792-237514 723 + hypothetical protein-
9rnhA YP_002291485.1 237511-237978 468 - ribonuclease H-
10NA YP_002291486.1 238043-238774 732 + DNA polymerase III subunit epsilon-
11tRNA-Asp - 238907-238983 77 + tRNA-Asp-
12NA YP_002291487.1 239314-240099 786 + putative aminopeptidase-
13NA YP_002291488.1 240725-241639 915 - hypothetical protein-
14NA YP_002291489.1 241683-242165 483 - hypothetical protein-
15NA YP_002291490.1 242189-243541 1353 - hypothetical protein-
16NA YP_002291491.1 243552-247076 3525 - hypothetical protein-
17NA YP_002291492.1 247095-248507 1413 - hypothetical protein-
18NA YP_002291493.1 248512-249204 693 - hypothetical protein-
19NA YP_002291494.1 249252-252215 2964 - ATP-dependent chaperone protein ClpB-
20NA YP_002291495.1 252224-252985 762 - hypothetical protein-
21NA YP_002291496.1 252990-254321 1332 - hypothetical proteinVirulence
22NA YP_002291497.1 254324-254848 525 - putative lipoprotein-
23NA YP_002291498.1 254845-256125 1281 - hypothetical protein-
24NA YP_002291499.1 256150-257232 1083 - hypothetical proteinVirulence
25NA YP_002291500.1 257196-259046 1851 - hypothetical proteinVirulence
26NA YP_002291501.1 259050-259463 414 - hypothetical protein-
27NA YP_002291502.1 259470-260945 1476 - hypothetical proteinVirulence
28NA YP_002291503.1 260996-261220 225 - hypothetical protein-
29NA YP_002291504.1 261255-261755 501 - hypothetical proteinVirulence
30NA YP_002291505.1 261770-261898 129 + hypothetical protein-
31NA YP_002291506.1 262182-262325 144 + hypothetical protein-
32NA YP_002291507.1 262452-262970 519 + hypothetical protein-
33NA YP_002291508.1 263180-265321 2142 + hypothetical protein-


tRNA-Asp tRNA-Asp PI: Esc.17aec32 aec31 aec30 aec29 aec28 aec26 aec25 aec24 aec23 aec22 aec19 aec18 aec17 aec16 aec15 PI: Esc.G2.NC_008563_P1APECO1_t03yafT aec32 aec31 aec30 aec29 aec28 aec26 aec25 aec24 aec23 aec22 APECO1_1761 aec19 aec18 aec17 aec16 aec15 PI: Pho.1-mltD gloB orf71 rnhA dnaQ -orf23

• PAIs homologous to this region

AGI-1 (Escherichia coli BEN2908)
PAI II APEC-O1 (Escherichia coli APEC O1)
tcd island (Photorhabdus luminescens W14)