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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Shigella sonnei 53G (NC_016822) Location : 241615 - 275358 bp Size : 33744 bp GC content : 51.7 % GC bias (=GCregion - GCgenome) : 0.68 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | tRNA-Asp | - | 241615-241691 | 77 | + | tRNA-Asp | - |
| 2 | dkgB | YP_005454815.1 | 241854-242657 | 804 | + | 2,5-diketo-D-gluconate reductase B | - |
| 3 | NA | YP_005454816.1 | 242654-243568 | 915 | - | LysR family transcriptional regulator | - |
| 4 | NA | YP_005454817.1 | 243809-244609 | 801 | + | hypothetical protein | - |
| 5 | NA | YP_005454818.1 | 244613-245236 | 624 | + | biotin synthesis protein | - |
| 6 | mltD | YP_005454819.1 | 245285-246643 | 1359 | - | membrane-bound lytic murein transglycosylase D | - |
| 7 | NA | YP_005454820.1 | 246715-247470 | 756 | - | hydroxyacylglutathione hydrolase | - |
| 8 | NA | YP_005454821.1 | 247504-248226 | 723 | + | hypothetical protein | - |
| 9 | rnhA | YP_005454822.1 | 248223-248690 | 468 | - | ribonuclease H | - |
| 10 | NA | YP_005454823.1 | 248755-249486 | 732 | + | DNA polymerase III subunit epsilon | - |
| 11 | tRNA-Asp | - | 249619-249695 | 77 | + | tRNA-Asp | - |
| 12 | NA | YP_005454824.1 | 250025-250810 | 786 | + | aminopeptidase | - |
| 13 | NA | YP_005454825.1 | 250947-251426 | 480 | - | hypothetical protein | - |
| 14 | NA | YP_005454826.1 | 252419-252901 | 483 | - | type VI secretion system effector | - |
| 15 | NA | YP_005454827.1 | 252925-254277 | 1353 | - | hypothetical protein | - |
| 16 | NA | YP_005454828.1 | 257831-259243 | 1413 | - | hypothetical protein | - |
| 17 | NA | YP_005454829.1 | 259248-259991 | 744 | - | type VI secretion-associated protein | - |
| 18 | NA | YP_005454830.1 | 259988-262777 | 2790 | - | ATP-dependent Clp proteinase ATP-binding chain | Virulence |
| 19 | NA | YP_005454831.1 | 262786-263547 | 762 | - | putative membrane protein Aec26 | - |
| 20 | NA | YP_005454832.1 | 263552-264883 | 1332 | - | hypothetical protein | Virulence |
| 21 | NA | YP_005454833.1 | 264886-265410 | 525 | - | lipoprotein | - |
| 22 | NA | YP_005454834.1 | 265407-266687 | 1281 | - | type VI secretion system protein ImpI | - |
| 23 | NA | YP_005454835.1 | 266712-267794 | 1083 | - | hypothetical protein | Virulence |
| 24 | NA | YP_005454836.1 | 267758-269608 | 1851 | - | type VI secretion system protein ImpG | Virulence |
| 25 | NA | YP_005454837.1 | 269612-270025 | 414 | - | type VI secretion system lysozyme-like protein | - |
| 26 | NA | YP_005454838.1 | 270032-270580 | 549 | - | type VI secretion protein EvpB | - |
| 27 | NA | YP_005454839.1 | 270617-271507 | 891 | - | hypothetical protein | - |
| 28 | NA | YP_005454840.1 | 271558-271782 | 225 | - | hypothetical protein | - |
| 29 | NA | YP_005454841.1 | 271817-272317 | 501 | - | hypothetical protein | Virulence |
| 30 | NA | YP_005454842.1 | 272744-272887 | 144 | + | hypothetical protein | - |
| 31 | NA | YP_005454843.1 | 273014-273532 | 519 | + | hemolysin co-regulated protein | - |
| 32 | NA | YP_005454844.1 | 273742-275358 | 1617 | + | Rhs element protein | - |