PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Yersinia pestis D106004 (NC_017154)
Location : 3990689 - 4010765 bp
Size : 20077 bp
GC content : 45.3 %
GC bias (=GCregion - GCgenome) : -2.36 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_005506353.1 3990689-3993547 2859 - putative insecticidal toxinVirulence
2tccC1 YP_005506354.1 3993572-3996403 2832 - toxin subunitVirulence
3NA YP_005506355.1 3996604-3996963 360 - hypothetical protein-
4NA YP_005506356.1 3996960-3997361 402 - putative phage-like protein-
5NA YP_005506357.1 3997374-3997676 303 - putative phage-like protein-
6NA YP_005506358.1 3997810-4002300 4491 - insecticidal toxin complexVirulence
7NA YP_005506359.1 4002357-4004498 2142 - toxin subunit-
8NA YP_005506360.1 4004567-4005949 1383 - toxin subunit-
9NA YP_005506361.1 4005990-4008491 2502 - putative insecticidal toxin-
10NA YP_005506362.1 4008727-4009539 813 - lysR-family transcriptional regulatory protein-
11NA YP_005506363.1 4009854-4010765 912 - LysR family transcriptional regulator-


PI: Yer.3tccC tccC - - - tcaC tcaB2 tcaR2 tcaR1 PI: Pho.1TccC2 TccC3 TccC4 TccC5 TccC3 TccC4 TccC2 TccC5 tchA tcdB1 tcdB2

• PAIs homologous to this region

tcd island (Photorhabdus luminescens W14)
tc-PAIYe (Yersinia enterocolitica W22703)