|
Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Salmonella enterica CFSAN001921 (NC_021814) Location : 3230221 - 3272038 bp Size : 41818 bp GC content : 54.4 % GC bias (=GCregion - GCgenome) : 2.19 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | NA | YP_008256536.1 | 3230221-3234315 | 4095 | - | type IV secretion protein Rhs | - |
| 2 | NA | YP_008256537.1 | 3234334-3234780 | 447 | - | hypothetical protein | - |
| 3 | NA | YP_008256538.1 | 3234804-3236993 | 2190 | - | type VI secretion protein Vgr | - |
| 4 | NA | YP_008256539.1 | 3237390-3237908 | 519 | - | SPI-6 associated protein | - |
| 5 | NA | YP_008256540.1 | 3237935-3238321 | 387 | - | hypothetical protein | - |
| 6 | NA | YP_008256541.1 | 3238348-3239136 | 789 | - | hypothetical protein | - |
| 7 | NA | YP_008256542.1 | 3239136-3243005 | 3870 | - | membrane protein | - |
| 8 | NA | YP_008256543.1 | 3243039-3243482 | 444 | - | Shiga toxin A subunit | - |
| 9 | NA | YP_008256544.1 | 3243673-3244446 | 774 | - | membrane protein | - |
| 10 | NA | YP_008256545.1 | 3244451-3245755 | 1305 | - | membrane protein | - |
| 11 | NA | YP_008256546.1 | 3245752-3247095 | 1344 | - | type VI secretion protein | - |
| 12 | NA | YP_008256547.1 | 3247099-3247635 | 537 | - | outer membrane lipoprotein | - |
| 13 | NA | YP_008256548.1 | 3247702-3248187 | 486 | - | Hcp1 family type VI secretion system effector | Virulence |
| 14 | NA | YP_008256549.1 | 3248330-3248713 | 384 | - | hypothetical protein | - |
| 15 | NA | YP_008256550.1 | 3248698-3249183 | 486 | - | hypothetical protein | - |
| 16 | NA | YP_008256551.1 | 3249488-3249973 | 486 | - | Hcp1 family type VI secretion system effector | Virulence |
| 17 | NA | YP_008256552.1 | 3250859-3252367 | 1509 | - | EvpB family type VI secretion protein | Virulence |
| 18 | NA | YP_008256553.1 | 3252391-3252933 | 543 | - | type VI secretion protein | Virulence |
| 19 | NA | YP_008256554.1 | 3253033-3255672 | 2640 | - | protein disaggregation chaperone | Virulence |
| 20 | NA | YP_008256555.1 | 3256040-3256942 | 903 | + | hypothetical protein | - |
| 21 | NA | YP_008256556.1 | 3256929-3257753 | 825 | + | hypothetical protein | - |
| 22 | NA | YP_008256557.1 | 3257750-3258244 | 495 | + | cytoplasmic protein | - |
| 23 | NA | YP_008256558.1 | 3258260-3260143 | 1884 | + | type VI secretion protein | Virulence |
| 24 | NA | YP_008256559.1 | 3260140-3261135 | 996 | + | SPI-6 associated protein | - |
| 25 | NA | YP_008256560.1 | 3261146-3262201 | 1056 | + | hypothetical protein | - |
| 26 | tRNA-Asp | - | 3262523-3262599 | 77 | - | tRNA-Asp | - |
| 27 | NA | YP_008256561.1 | 3262733-3263473 | 741 | - | DNA polymerase III subunit epsilon | - |
| 28 | NA | YP_008256562.1 | 3263528-3263995 | 468 | + | ribonuclease H | - |
| 29 | NA | YP_008256563.1 | 3263992-3264714 | 723 | - | hypothetical protein | - |
| 30 | NA | YP_008256564.1 | 3264749-3265504 | 756 | + | hydroxyacylglutathione hydrolase | - |
| 31 | mltD | YP_008256565.1 | 3265576-3266943 | 1368 | + | membrane protein | - |
| 32 | NA | YP_008256566.1 | 3266999-3267769 | 771 | - | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | - |
| 33 | NA | YP_008256567.1 | 3267847-3268647 | 801 | - | hypothetical protein | - |
| 34 | NA | YP_008256568.1 | 3268779-3269954 | 1176 | - | sugar MFS transporter | - |
| 35 | NA | YP_008256569.1 | 3270059-3270973 | 915 | + | LysR family transcripitonal regulator | - |
| 36 | dkgB | YP_008256570.1 | 3270994-3271797 | 804 | - | 2,5-diketo-D-gluconic acid reductase | - |
| 37 | tRNA-Asp | - | 3271962-3272038 | 77 | - | tRNA-Asp | - |
