Gene Information

Name : BB3399 (BB3399)
Accession : NP_889933.1
Strain : Bordetella bronchiseptica RB50
Genome accession: NC_002927
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 3637414 - 3638265 bp
Length : 852 bp
Strand : -
Note : ortholog of Bordetella pertussis (BX470248) BP2330

DNA sequence : 
ATGCGTAACGCGCCCAATGTCCCGGTGCTGATGTACCACCACGTCACCCCGGCCGGCGGCATGATCGCCGCCACGCCCGA
GGTGTTCGAACGGCAGATCGCCGCGCTGGCGCGGGCCGGCTACCGCTCGCTGGGCACGGCCGAGTTCGCCGCCTACCTGG
ACGGCGCCCCGGTGCCCGAGAAATCGGTGCTGATCACCTTCGACGACGGATACCTGAACAACTGGGTGTATGCCCACCCG
ATCCTGCAGCGCCACGGCATGAAGGCCGTGCTGTTCCTGATCACCGGCCTGCTGGGCGATGGTCCGGCGCGGCCCTGCGC
CGGGCAGGACGGGCCGCTGCCGCCCGCGCCCGACCACGACGAAAGCAAGCGCCTGATCGCCGCCGGACGCGCCGACGAGG
TCATGCTGCGCTGGAGCGAAGTGCAGGCCATGCTGGCGGCGGGCACCTTCGAGGTGCATTCGCACACCCATACCCATACG
CGCTGGGACAAGCAGTGCGGCCCCGACGTCGCCGCCAAGCGCGCCCATATCGCCCAGGAGCTGGCCGATTCGCGCCGGGC
GCTGCAGGCCCGGCTGGGCGAGGTCAGCGACCACCTGTGCTGGCCCCAGGGCTATTTCGACGCCGACTATGTACAGGCGG
CGCGCGACGCCGGCTTTCGCCATCTCTACACCACCGACGCCCTGGGCCAGAACGTCCCGGGCGGCGATCCCGCACACATA
TACCGCTTCGCGGTGCGCAACCGCGCCGGCGGCTGGCTCAACCGCCGCATCTGGCTGGCGCGCCATCCCTGGATCGGCCC
GCGCTATCACGCCTGGAAGGCCTGGAAGAAAAAGCTGAGGAGGCGCGCATGA

Protein sequence : 
MRNAPNVPVLMYHHVTPAGGMIAATPEVFERQIAALARAGYRSLGTAEFAAYLDGAPVPEKSVLITFDDGYLNNWVYAHP
ILQRHGMKAVLFLITGLLGDGPARPCAGQDGPLPPAPDHDESKRLIAAGRADEVMLRWSEVQAMLAAGTFEVHSHTHTHT
RWDKQCGPDVAAKRAHIAQELADSRRALQARLGEVSDHLCWPQGYFDADYVQAARDAGFRHLYTTDALGQNVPGGDPAHI
YRFAVRNRAGGWLNRRIWLARHPWIGPRYHAWKAWKKKLRRRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
shf AAL08449.1 putative protein Shf Not tested SRL Protein 1e-43 44
STY0338 NP_454909.1 conserved hypothetical protein Not tested SPI-6 Protein 1e-43 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BB3399 NP_889933.1 hypothetical protein VFG1040 Protein 8e-44 44