Gene Information

Name : BP2330 (BP2330)
Accession : NP_880968.1
Strain : Bordetella pertussis Tohama I
Genome accession: NC_002929
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 2463199 - 2464050 bp
Length : 852 bp
Strand : -
Note : Similar to many eg. Xylella fastidiosa hypothetical protein Xf1469 xf1469 TR:Q9PDB0 (EMBL:AE003977) (284 aa) fasta scores: E(): 1.4e-61, 56.02% id in 282 aa

DNA sequence : 
ATGCGTAACGCGCCCAATGTCCCGGTGCTGATGTACCACCACGTCACCCCGGCCGGCGGCATGATCGCCGCCACGCCCGA
GGTGTTCGAACGGCAGATCGCCGCGCTGGCGCGGGCCGGCTACCGCTCGCTGGGCACGGCCGAGTTCGCCGCCTACCTGG
ACGGCGCCCCGGTGCCCGAGAAATCGGTGCTGATCACCTTCGACGACGGATACCTGAACAACTGGGTGTATGCCCACCCG
ATCCTGCAGCGCCACGGCATGAAGGCCGTGCTGTTCCTGATCACCGGCCTGCTGGGCGATGGTCCGGCGCGGCCCTGCGC
CGGGCAGGACGGGCCGCTGCCGCCCGCGCCCGACCACGACGAAAGCAAGCGCCTGATCGCCGCCGGACGCGCCGACGAGG
TCATGCTGCGCTGGAGCGAAGTGCAGGCCATGCTGGCGGCGGGCACCTTCGAGGTGCATTCGCACACCCATACCCATACG
CGCTGGGACAAGCAGTGCGGCCCCGACGTCGCCGCCAAGCGCGCCCATATCGTCCAGGAGCTGGCCGATTCGCGCCGGGC
GCTGCAGGCCCGGCTGGGCGAGGTCAGCGACCACCTGTGCTGGCCCCAGGGCTATTTCGACGCCGACTATGTGCAGGCGG
CGCGCGACGCCGGCTTTCGCCATCTCTACACCACCGACGCCCTGGGCCAGAACGTCCCGGGCGGCGATCCCGCACACATA
TACCGCTTCGCGGTGCGCAACCGCGCCGGCGGCTGGCTCAACCGCCGCATCTGGCTGGCGCGCCATCCCTGGATCGGCCC
GCGCTATCACGCCTGGAAGGCCTGGAAGAAAAAGCTGAGGAGGCGCGCATGA

Protein sequence : 
MRNAPNVPVLMYHHVTPAGGMIAATPEVFERQIAALARAGYRSLGTAEFAAYLDGAPVPEKSVLITFDDGYLNNWVYAHP
ILQRHGMKAVLFLITGLLGDGPARPCAGQDGPLPPAPDHDESKRLIAAGRADEVMLRWSEVQAMLAAGTFEVHSHTHTHT
RWDKQCGPDVAAKRAHIVQELADSRRALQARLGEVSDHLCWPQGYFDADYVQAARDAGFRHLYTTDALGQNVPGGDPAHI
YRFAVRNRAGGWLNRRIWLARHPWIGPRYHAWKAWKKKLRRRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
shf AAL08449.1 putative protein Shf Not tested SRL Protein 2e-43 44
STY0338 NP_454909.1 conserved hypothetical protein Not tested SPI-6 Protein 1e-43 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BP2330 NP_880968.1 hypothetical protein VFG1040 Protein 1e-43 44