Gene Information

Name : Daro_0156 (Daro_0156)
Accession : YP_283385.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Virulence
Product : polysaccharide deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 170917 - 171747 bp
Length : 831 bp
Strand : +
Note : -

DNA sequence :
ATGAGCTTCGGGCAGCCGCTGCCCGTGCTGATGTACCACCACATCAGCCCGAAACCCGGGCTGGTGACCTGCTCGCCGGA
AAATTTCCGGGCGCACATGCAGTGGCTGGCCGAAAATGGCTGGAAAACCCTGTCTACCGATGAATTCACCCGGATTCTGG
CGACCGGCGAGGTGCCAAAGAAAAGCGTGCTGGTCACCTTCGACGACGGCTATCTCGACAACTGGGTCTACGCCCACCCA
GTACTCAAGGAGTTTGGCCAGCGCGCCACGTTGTTCCTGATCACTGGCTGGATGGGCGAAGGCGAGGTCCGTCCGCATGC
TGGCCAACCCGACGTGCCGGACGTGCCGACCCATGCTCAGGCGATGGCTGCCGCCGCCGAGGGCAAGCTGGATGACGCCT
TTCTGCGCTGGTCGGAAGTTGAGGCCATGCGGGATGCTGGCACCTTCGATTTCCACTCGCACACCCACACCCATACTCGT
TGGGATCGCACGATTGCCGATCAGTCCGCGCGCGATCAGGCGCTGGCCGACGATCTGGCGGCCTCGCGTGCCACGCTGGC
CGCCCGGCTTGGCGTGGACAGCCCGCATCTGTGCTGGCCGCAGGGCTATTTTGATGCTGCCTACCAGCGCGTGGCGCGGG
CGGCAGGTTTCACCCATCTTTACACCACCGAGCATGGTGTGGTGCGCCGAGAAGTTGATCCGGGGCGGATTCCGCGTCTG
GTCATCAAGGACAAGCCGGCCAAGTGGTTCGGCGGGCGCATGGGCATCTACGGCCGGCCGCTGCTGTCGGCGCTCTATCT
CGGCCTGAAGTCGGGCGGGAAAGGCCACTGA

Protein sequence :
MSFGQPLPVLMYHHISPKPGLVTCSPENFRAHMQWLAENGWKTLSTDEFTRILATGEVPKKSVLVTFDDGYLDNWVYAHP
VLKEFGQRATLFLITGWMGEGEVRPHAGQPDVPDVPTHAQAMAAAAEGKLDDAFLRWSEVEAMRDAGTFDFHSHTHTHTR
WDRTIADQSARDQALADDLAASRATLAARLGVDSPHLCWPQGYFDAAYQRVARAAGFTHLYTTEHGVVRREVDPGRIPRL
VIKDKPAKWFGGRMGIYGRPLLSALYLGLKSGGKGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
shf AAL08449.1 putative protein Shf Not tested SRL Protein 9e-38 46
STY0338 NP_454909.1 conserved hypothetical protein Not tested SPI-6 Protein 2e-38 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_0156 YP_283385.1 polysaccharide deacetylase VFG1040 Protein 5e-38 46