Gene Information

Name : BAV2237 (BAV2237)
Accession : YP_786751.1
Strain : Bordetella avium 197N
Genome accession: NC_010645
Putative virulence/resistance : Virulence
Product : lipopolysaccharide core oligosaccharide biosynthesis protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 2409888 - 2410736 bp
Length : 849 bp
Strand : -
Note : -

DNA sequence : 
ATGAGAAAAAATGCCCCCAGTGTTCCGGTGCTGATGTATCACCACATTACGCCGGAGGGCGGCATGATTGCTGCCACGCC
CGAGGTTTTCGAGGCGCAGATTGCCAGTCTGGCGGCTGCCGGCTACCAATCCTTGTCGGCCGATCAGTTCGCCGCCTATC
TTGCCGGTGGCGAGGTGCCGGAGAAATCCGTGCTGATCACGTTTGACGACGGCTACCTCAATAACTGGGTGCACGCGCAT
CCGGTGCTCAAACGCCACGGCATGAAGGCCGTCATCTTTCTCATCACCGGCCTGATTGGCGACGGTCCGGCGCGGCCCAG
CCCCGGCCAAGCGCTGCCGGCCGATGTCGATCACGACACAAGCAAGCGCCTTATCGCCGCCGGCCGCGCCGACGAAGTCA
TGCTGCGCTGGAGTGAGGTAAGGGCCATGATCGAGGCCGGCACCTTTGAGTTCCACTCGCATACCCACACCCATACCCGC
TGGGATAAAGAATGTGGCGCTGATGTCAGCGCCAAGCGCCGCCACATCGCGCAAGAGCTGGATGATTCCCGCGCCACCCT
GATCGAGCGTCTGGGCAGCGTAAGCGACCACCTCTGCTGGCCGCAAGGTTATTTCGATGCTGACTACCTGCAGGCGGCCC
GCGAAGCGGGTTTTCGGCATCTTTACACCACGGACCCGCTCGGACAAAACCGGCCTGGCTCCGATCCTGCCCATATTTAT
CGTTTTGCGGTGCGCAATCGCGCAGGCGGGTGGCTCAAGCGGCGTATCTGGCAATCCCGGGGTCGTTTGGTCGGACCCGT
TTTTCACGCCTGGAAAAAACTCAAAAAGCGTCTTAGGAGGCGTGCATGA

Protein sequence : 
MRKNAPSVPVLMYHHITPEGGMIAATPEVFEAQIASLAAAGYQSLSADQFAAYLAGGEVPEKSVLITFDDGYLNNWVHAH
PVLKRHGMKAVIFLITGLIGDGPARPSPGQALPADVDHDTSKRLIAAGRADEVMLRWSEVRAMIEAGTFEFHSHTHTHTR
WDKECGADVSAKRRHIAQELDDSRATLIERLGSVSDHLCWPQGYFDADYLQAAREAGFRHLYTTDPLGQNRPGSDPAHIY
RFAVRNRAGGWLKRRIWQSRGRLVGPVFHAWKKLKKRLRRRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
shf AAL08449.1 putative protein Shf Not tested SRL Protein 4e-42 47
STY0338 NP_454909.1 conserved hypothetical protein Not tested SPI-6 Protein 2e-40 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BAV2237 YP_786751.1 lipopolysaccharide core oligosaccharide biosynthesis protein VFG1040 Protein 2e-42 47