Gene Information

Name : Smal_2837 (Smal_2837)
Accession : YP_002029220.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Virulence
Product : polysaccharide deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 3154703 - 3155560 bp
Length : 858 bp
Strand : +
Note : PFAM: polysaccharide deacetylase; KEGG: xfn:XfasM23_0722 polysaccharide deacetylase

DNA sequence : 
ATGGCTAATGCCCGAACCGTACCGGTGCTGATGCACCACCATGTCAGCAACTCACCTGGCATGATCACCGTATCCCCGGA
GAACTTCGAGAGCCAGATCGCGTGGCTTGCACGTACCGGCTGGACGTCATTGACGCTGGACCAGTACGCCGGCTTCCTCG
CCGGCAAACCGGTACCGCGCAAGTCGATCGTGATCACGTTCGACGACGGCTATCTGGACAACTGGGTCTATGCCCATCCG
ATCCTGCAGAAGTACGGCATGCATGCGGTGGTATTCGTGGTCACCGGCTGGATGCATGAAGGTCCGGCGCGCCCGCACGC
AGGCATCGAAGGCGCCCAGCTGCCGGCTACGCCGGAGCATCGTGCCTGCGAAGACCTGATCTACAAGCAGGGCCGCAGCG
ACGAAGTGATGATGCGCTGGAGCGAAGCACGCGCCGCGATCGAGGCCGGCACGTTCGAGGTCCACTGCCATACCCACAGC
CACACCCGCTGGCTGAAGCGTGATGATCTGGATCGCGCACAACGCCGGGAAGGCATCAGTGGCGATCTGGCGATGGCCAA
GCAAACGCTGCTCGAGAAGCTCGGCGAGGTCTCCGACACGCTGTGCTGGCCTTATGGCGACTTCGACGATGACTACATCG
AGGTGGCGCGCGAACAGGGCTTCCGCTATCTGCACACCACCCATCCATTTGGCCGCAACGTGGTTGGTGGAGATCCAGAG
CGCATCTACCGCTTTGCGATCCGCAACCGCCCGGCCAGCTGGCTGCGCAAGCGCATCGCCTGGAGTTACAACCCGCTGAT
TGCACCGATCTTCAACAGTTTCAAGGCGCGGCAGAAGAAGATGGTGCCGGGCCCGTAA

Protein sequence : 
MANARTVPVLMHHHVSNSPGMITVSPENFESQIAWLARTGWTSLTLDQYAGFLAGKPVPRKSIVITFDDGYLDNWVYAHP
ILQKYGMHAVVFVVTGWMHEGPARPHAGIEGAQLPATPEHRACEDLIYKQGRSDEVMMRWSEARAAIEAGTFEVHCHTHS
HTRWLKRDDLDRAQRREGISGDLAMAKQTLLEKLGEVSDTLCWPYGDFDDDYIEVAREQGFRYLHTTHPFGRNVVGGDPE
RIYRFAIRNRPASWLRKRIAWSYNPLIAPIFNSFKARQKKMVPGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0338 NP_454909.1 conserved hypothetical protein Not tested SPI-6 Protein 2e-43 42
shf AAL08449.1 putative protein Shf Not tested SRL Protein 1e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_2837 YP_002029220.1 polysaccharide deacetylase VFG1040 Protein 5e-40 42