Gene Information

Name : ECH74115_B0111 (ECH74115_B0111)
Accession : YP_002268486.1
Strain :
Genome accession: NC_011350
Putative virulence/resistance : Virulence
Product : polysaccharide deacetylase family protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 70391 - 71212 bp
Length : 822 bp
Strand : +
Note : identified by match to protein family HMM PF01522

DNA sequence : 
ATGTTGAATGCAAGGCATCTTCCCGTACTGATGTATCATCATGTCAGTCGTTGTCCGGGGCTTGTGACACTCTCACCTGA
AACATTTTGTGAACAGATGAAGTGGCTCGCAGATAATAACTGGCGGACGGTAACATCTGCTGAGCTTGAATATTTTTATC
AGGGGGGAACGCTTCCACGAAAGAGTGTCATGCTCACATTCGATGATGGTTATCTTGATAACTGGCTCAGAGCATGGCCG
GTCCTGAAGGAATATAACCTTCATGCACATATTTTTCTCATTACGGGGCTGATTGGTAAGGGAAACGTACGTAGCAGGCA
GGAGCAGGAATATTCTCACCGCGACTGTGAACGGTTGATTGCCGATAACCGTTCAGATGAGGTCATGCTTCGCTGGTCTG
AAGTCCGGGAAATGCGTGATTCCGGACTGGTTGAATTTCATGTGCACACCCATTCACATAAACGCTGGGACAGGTTGTCT
GTATCACGTGCTGAACAGTGCCGGCTCATGAAAGAAGATATTCTGGTGGGAAAACAATGTCTGACGGAAAAGCTGGGGTT
CTGTAGTTCCCATCTGTGCTGGCCTGAAGGATATTATAATCGGGATTATATTAATCTCGCCGGTAAGCTTGGTTTCTCTT
ATTTATATACAACCGAAAGAAGAATGAACTGTCCTGAAAATGGTTCATTACGCATAGGGCGTATCAGCACCAAAGAGCGG
GAACATTCCGGCTGGCTGAAACGACGCCTTTTTTATTATACAACGCCACTTTTTTCTTCAGTACTGGCTCTTCATAAGGG
GCCAAGATTACCAGATAATTAA

Protein sequence : 
MLNARHLPVLMYHHVSRCPGLVTLSPETFCEQMKWLADNNWRTVTSAELEYFYQGGTLPRKSVMLTFDDGYLDNWLRAWP
VLKEYNLHAHIFLITGLIGKGNVRSRQEQEYSHRDCERLIADNRSDEVMLRWSEVREMRDSGLVEFHVHTHSHKRWDRLS
VSRAEQCRLMKEDILVGKQCLTEKLGFCSSHLCWPEGYYNRDYINLAGKLGFSYLYTTERRMNCPENGSLRIGRISTKER
EHSGWLKRRLFYYTTPLFSSVLALHKGPRLPDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
shf AAL08449.1 putative protein Shf Not tested SRL Protein 4e-79 69
STY0338 NP_454909.1 conserved hypothetical protein Not tested SPI-6 Protein 3e-83 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_B0111 YP_002268486.1 polysaccharide deacetylase family protein VFG1040 Protein 2e-79 69