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Name : shf (ECED1_5144) Accession : YP_002400884.1 Strain : Escherichia coli ED1a Genome accession: NC_011745 Putative virulence/resistance : Virulence Product : putative polysaccharide deacetylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0726 EC number : - Position : 5079993 - 5080814 bp Length : 822 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme DNA sequence : TTGTTTAAAGCAAATCATGTTCCGGTATTAATGTATCATCATGTCAGCCATTGCCCAGGACTGGTTACACTTTCTCCCGA GACATTCCGGAAACAAATGAAATGGTTGGCTGAAAACAACTGGAAAACACTGTCATCAGATGAACTGGAGTTTTTTTATC GGGGCGGAAAACTTCCCCGTAAAAGCGTTATGTTGACATTTGATGATGGATACCTTGACAACTGGTTTCAGGTATATCCT TTATTAAACGAGTTTAATCTCAAGGCACATATTTTTTTAATTACCAGTTTTATTGGAAATGGTCCGGTTCGTCACTCTCC TGGAAAGGAATATTCTCATCGCGATTGCGAACATCAAATAGCAACCGGGAATGCTGATAATGTTATGCTTCGCTGGTCTG AAGTGAACGAAATGTTGCAATCTGGTCTGGTCGAATTTCATGTTCATACACATACTCATACACGTTGGGATAAAAAGCTC ACTTCACGAGAAGAACAGTGTAAACATCTTCGGCAGGACTTATTGAGCGGGAGAGAATATTTAAAAAAAATGACAGGAAA ATGCAGTAAACATTTGTGTTGGCCGGAAGGTTATTATAACAAGGATTATATTCAGATCGCTGAAGAACTTGGATTCCATT ATTTATATACAACAGAAAGAAGAATGAATGCTCCTGCTAAAGGAACTACACGGATAGGAAGAATAAGCACCAAGGAACGG GAAAATTGCGTATGGCTGAAAAGACGACTTTTTTATTATACAACACCGTTTTTTTCATCGTTGCTGGCCCTTCATAAGGG GCCAAGATTACCGGATGACTAA Protein sequence : MFKANHVPVLMYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDGYLDNWFQVYP LLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKL TSREEQCKHLRQDLLSGREYLKKMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKER ENCVWLKRRLFYYTTPFFSSLLALHKGPRLPDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| shf | AAL08449.1 | putative protein Shf | Not tested | SRL | Protein | 3e-107 | 93 |
| STY0338 | NP_454909.1 | conserved hypothetical protein | Not tested | SPI-6 | Protein | 4e-82 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| shf | YP_002400884.1 | putative polysaccharide deacetylase | VFG1040 | Protein | 2e-107 | 93 |
