|
Name : shf (EC55989_4952) Accession : YP_002405802.1 Strain : Escherichia coli 55989 Genome accession: NC_011748 Putative virulence/resistance : Virulence Product : polysaccharide deacetylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0726 EC number : - Position : 5042511 - 5043332 bp Length : 822 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme DNA sequence : TTGTTTAAAGCAAATCATGTTCCGGTATTAATGTATCATCATGTCAGCCATTGCCCAGGACTGGTTACACTTTCTCCCGA GACATTCCGGAAACAAATGAAATGGTTGGCTGAAAACAACTGGAAAACACTGTCATCAGATGAACTGGAGTTTTTTTATC GGGGCGGAAAACTTCCCCGTAAAAGCGTTATGTTGACATTTGATGATGGATACCTTGACAACTGGTTTCAGGTATATCCT TTATTAAACGAGTTTAATCTCAAGGCACATATTTTTTTAATTACCAGTTTTATTGGAAATGGTCCGGTTCGTCACTCTCC TGGAAAGGAATATTCTCATCGCGATTGCGAACATCAAATAGCAACCGGGAATGCTGATAATGTTATGCTTCGCTGGTCTG AAGTGAACGAAATGTTGCAATCTGGTCTGGTCGAATTTCATGTTCATACACATACTCATACACGTTGGGATAAAAAGTTC ACTTCACGAGAAGAACAGTGTAAACATCTTCGGCAGGACTTATTGAGCGGGAGAGAATATTTAAAAAAAATGACAGGAAA ATGCAGTAAACATTTGTGTTGGCCGGAAGGTTATTATAACAAGGATTATATTCAGATCGCTGAAGAACTTGGATTCCATT ATTTATATACAACAGAAAGAAGAATGAATGCTCCTGCTAAAGGAACTACACGGATAGGAAGAATAAGCACCAAGGAACGG GAAAATTGCGTATGGCTGAAAAGACGACTTTTTTATTATACAACACCGTTTTTTTCATCGTTGCTGGCCCTTCATAAGGG GCCAAGATTACCGGATGACTAA Protein sequence : MFKANHVPVLMYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDGYLDNWFQVYP LLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKF TSREEQCKHLRQDLLSGREYLKKMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKER ENCVWLKRRLFYYTTPFFSSLLALHKGPRLPDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| shf | AAL08449.1 | putative protein Shf | Not tested | SRL | Protein | 8e-108 | 94 |
| STY0338 | NP_454909.1 | conserved hypothetical protein | Not tested | SPI-6 | Protein | 5e-82 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| shf | YP_002405802.1 | polysaccharide deacetylase | VFG1040 | Protein | 5e-108 | 94 |
