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Name : shf (ECIAI39_4761) Accession : YP_002410618.1 Strain : Escherichia coli IAI39 Genome accession: NC_011750 Putative virulence/resistance : Virulence Product : putative polysaccharide deacetylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0726 EC number : - Position : 4966323 - 4967144 bp Length : 822 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme DNA sequence : TTGTTTAAAGCAAATCATGTTCCGGTATTAATGTATCATCATGTCAGCCATTGCCCAGGACTGGTTACACTTTCTCCCGA GACATTCCGGAAACAAATGAAATGGTTGGCTGAAAACAACTGGAAAACACTGTCATCAGATGAACTGGAGTTTTTTTATC GGGGCGGAAAACTTCCCCGTAAAAGCGTTATGTTGACATTTGATGATGGATACCTTGACAACTGGTTTCAGGTATATCCT TTATTAAACGAGTTTAATCTCAAGGCACATATTTTTTTAATTACCAGTTTTATTGGAAATGGTCCGGTTCGTCACTCTCC TGGAAAGGAATATTCTCATCGCGATTGCGAACATCAAATAGCAACCGGGAATGCTGATAATGTTATGCTTCGCTGGTCTG AAGTGAACGAAATGTTGCAATCTGGTCTGGTCGAATTTCATGTTCATACACATACTCATACACGTTGGGATAAAAAGTTC ACTTCACGAGAAGAACAGTGTAAACATCTTCGGCAGGACTTATTGAGCGGGAGAGAATATTTAAAAAAAATGACAGGAAA ATGCAGTAAACATTTGTGTTGGCCGGAAGGTTATTATAACAAGGATTATATTCAGATCGCTGAAGAACTTGGATTCCATT ATTTATATACAACAGAAAGAAGAATGAATGCTCCTGCTAAAGGAACTACACGGATAGGAAGAATAAGCACCAAGGAACGG GAAAATTGCGTATGGCTGAAAAGACGACTTTTTTATTATACAACACCGTTTTTTTCATCGTTGCTGGCCCTTCATAAGGG GCCAAGATTACCGGATGACTAA Protein sequence : MFKANHVPVLMYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDGYLDNWFQVYP LLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKF TSREEQCKHLRQDLLSGREYLKKMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKER ENCVWLKRRLFYYTTPFFSSLLALHKGPRLPDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| shf | AAL08449.1 | putative protein Shf | Not tested | SRL | Protein | 8e-108 | 94 |
| STY0338 | NP_454909.1 | conserved hypothetical protein | Not tested | SPI-6 | Protein | 5e-82 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| shf | YP_002410618.1 | putative polysaccharide deacetylase | VFG1040 | Protein | 5e-108 | 94 |
