Gene Information

Name : BC1002_6250 (BC1002_6250)
Accession : YP_003609621.1
Strain :
Genome accession: NC_014119
Putative virulence/resistance : Unknown
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3522
EC number : -
Position : 714676 - 716025 bp
Length : 1350 bp
Strand : -
Note : KEGG: bgl:bglu_2g01460 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876

DNA sequence :
ATGAGTTGGTATAGCAAAGTTGTTTGGAGCGAAGGACTATTCCTGCGCCCGCAATTGTTTCAGCAGCAGGAACGGTATTT
CGAGTCGTTCGCGCATCGCCGCAGTGCGCCGCTGAGCCCGTTTTTCTGGGGCTTCAGCCGTTATGAAATCGATCAGGAAT
CGCTCGGATTCGGCAAGCTGGTATTCAAGAGCGGGCTGGGCGTATTTCCAGACGGCACGCCGTTCGAGGTGCCGGGTCTG
ACGCAGCCTCCGCCCCCACTGACGATCGGCGCGGAACATCAGGAGCAGGTGATCTACCTGGCGATCCCGCTGCGCTTGCC
CAATACCGAGGAAACCGCCTTCACCGAGCAAAGCGGCTCGCTCGCCCGTTACCATGCGTACGACACGGAACTGCGCGACA
GCAATGCGATCGGCCAAGGTCCGAAGCCCGTCCAACTGTCGAATCTGCGCTTGCGGCTGTTGCCCGAGAAAGAGCTGACG
CAGTCCTGGATCGGTGTTGCGCTGACGCGCGTGAAGGCGCTGCATGCCGACGGCGCCGTGTCGCTGCACAGCACCGACCA
CATTCCGCCCGTGACCGGTTACGGCGCGAATCCATTGCTGCGGGAATGGGCGATGCAACTGCACGGCCTCGCGCGACTAC
GTGCCGACGCGCTCGCCGCTCGTCTGTCAGGTGCCGATGGCCGTTCGGGCGCGGCGGCCGAAGCGGCCGACTTTCTGCTG
CTCCAGGTGCTCAATCGCTATGAGCCGCTGCTCGAACATATTTGCCAACTCGAGGAGACGGCGCCGGTAAACCTGTATCG
CGAACTCGCGCTTTTTGCCGGCGAGCTTTCGACCTTCGTGCGTCCGCAAACGCGTCGTCCGCGGCCGGCTCCAGGCTATG
ACCACGCGCAGCTCTACCGCAGTATCAGGCCGCTCGTCGAGGAGGTTCACTATCTGTTGAACCAGGTGTTGATTCGCAGT
GCGCAGCCGATTGCACTGACGGAGCAGGCGCACGGCATCCGTACGGCCGCCACGTTGCCGAACGAACTTGCAGGCTATTC
GAGCCTCGTGCTCGCGGTGGGCGCGCAGATGCCTGCCGAATTGCTGCAGCAGCAGTTTCTTGCCCAAACGAAGATCAGCC
ATCCGCAGCGCTTGCCGGAATTGATCCGTTCACACCTGCCGGGTTTGACAATGGCGACGCTGCCGGTTCCTCCGCGCCAG
ATTCCGTTCAACTCGGGCTTTATCTATTTCGAACTGTCGCGTACCGGACCGTTCTGGGAACAGATTGCACGTCACGGAGG
GCTTGCCATGCATGTCGCCGGACACTTCCCGGAACTCAAGCTTGAACTGTGGGGCGTGCGTCAAAAATGA

Protein sequence :
MSWYSKVVWSEGLFLRPQLFQQQERYFESFAHRRSAPLSPFFWGFSRYEIDQESLGFGKLVFKSGLGVFPDGTPFEVPGL
TQPPPPLTIGAEHQEQVIYLAIPLRLPNTEETAFTEQSGSLARYHAYDTELRDSNAIGQGPKPVQLSNLRLRLLPEKELT
QSWIGVALTRVKALHADGAVSLHSTDHIPPVTGYGANPLLREWAMQLHGLARLRADALAARLSGADGRSGAAAEAADFLL
LQVLNRYEPLLEHICQLEETAPVNLYRELALFAGELSTFVRPQTRRPRPAPGYDHAQLYRSIRPLVEEVHYLLNQVLIRS
AQPIALTEQAHGIRTAATLPNELAGYSSLVLAVGAQMPAELLQQQFLAQTKISHPQRLPELIRSHLPGLTMATLPVPPRQ
IPFNSGFIYFELSRTGPFWEQIARHGGLAMHVAGHFPELKLELWGVRQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0304 NP_454884.1 conserved hypothetical protein Not tested SPI-6 Protein 5e-112 56