Gene Information

Name : BurJV3_2862 (BurJV3_2862)
Accession : YP_004793407.1
Strain : Stenotrophomonas maltophilia JV3
Genome accession: NC_015947
Putative virulence/resistance : Virulence
Product : polysaccharide deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 3139983 - 3140840 bp
Length : 858 bp
Strand : +
Note : PFAM: Polysaccharide deacetylase; KEGG: sml:Smlt3412 lipopolysaccharide core oligosaccharide biosynthesis protein

DNA sequence : 
ATGGCTAATGCCAGAACCGTACCGGTGCTGATGCACCATCATGTCAGCAACTCGCCGGGCATGATCACCGTATCCCCGGA
GAACTTCGAGAGCCAGATCGCCTGGCTGGCACGTACCGGCTGGACATCGCTGACGCTGGACCAGTACGCCGACTTCCTTG
CCGGCAAGCCGGTACCGCGCAAGTCGATCGTGATCACGTTCGATGACGGCTACCTGGACAACTGGGTCTACGCCCACCCG
ATCCTGCAGAAGTACGGCATGCATGCGGTGGTGTTCGTGGTCACCGGCTGGATGCACGAAGGCCCGGTGCGCCCGCACGC
CGGCATCGAAGGCGCCGAGCTGCCGGTTACGCCGGAGCACCGTGCCTGCGAAGACCTGATCTACAAGCAGGGCCGCAGCG
ACGAAGTGATGATGCGCTGGAGCGAAGCGCGCGCGGCGATCGAAGCCGGCACGTTCGAGGTCCACTGCCATACCCACAGC
CACACCCGCTGGCTGAAGCGTGACGACCTGGATCGTGCGCAGCGCCGCGAAGGCATCAGCGGTGACCTGGCGATGGCCAG
GCAGACGCTGCTGGAGAAGCTCGGCGAAGTCTCCGACACGCTGTGCTGGCCCTATGGCGACTTCGACGATGACTACATCG
AAGTGGCGCGCGAACAGGGCTTCCGCTACCTGCATACCACCCATCCGTTCGGCCGCAACGTGGTGGGTGGAGATCCGGAG
CGCATCTACCGTTTCGCGATCCGCAACCGCCCGGCCAGCTGGCTGCGCAAACGCATCGCCTGGAGCTACAACCCGCTGAT
CGCGCCGATCTTCAACGGCTTCAAGGCCCGGCAGAAGAAGATGGTGCCGGGCCCGTAA

Protein sequence : 
MANARTVPVLMHHHVSNSPGMITVSPENFESQIAWLARTGWTSLTLDQYADFLAGKPVPRKSIVITFDDGYLDNWVYAHP
ILQKYGMHAVVFVVTGWMHEGPVRPHAGIEGAELPVTPEHRACEDLIYKQGRSDEVMMRWSEARAAIEAGTFEVHCHTHS
HTRWLKRDDLDRAQRREGISGDLAMARQTLLEKLGEVSDTLCWPYGDFDDDYIEVAREQGFRYLHTTHPFGRNVVGGDPE
RIYRFAIRNRPASWLRKRIAWSYNPLIAPIFNGFKARQKKMVPGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0338 NP_454909.1 conserved hypothetical protein Not tested SPI-6 Protein 2e-43 43
shf AAL08449.1 putative protein Shf Not tested SRL Protein 3e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BurJV3_2862 YP_004793407.1 polysaccharide deacetylase VFG1040 Protein 2e-40 43