Gene Information

Name : ybeJ (STM474_0317)
Accession : YP_005241249.1
Strain : Salmonella enterica ST4/74
Genome accession: NC_016857
Putative virulence/resistance : Virulence
Product : putative xylanase/chitin deacetylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 346380 - 347273 bp
Length : 894 bp
Strand : +
Note : -

DNA sequence : 
ATGTTTAGGGGGCTTTTTCTTGTCCCCTCAGGCGTAAAAATAATTTATTTTTTACATAAAGGAATAAAGCATATGTCTTA
TGCACGACATTTACCGGTATTAATGTATCACCATGTCAGTGATAAACCCGGACAGATAACCTTATCTCCCCGTACGTTCC
GGGCGCAGATGAAATGGCTGGCCGAATCTGGCTGGAAAACCGTTACTGCTGCAGAGGTGGAAGCTTTTTATCATGGTGCA
AGATTGCCTCGTAAAAGCGTCATGCTGACCTTTGATGGCGGCTGGCTGGATAACTGGTTGCAGGTTTTTCCGGTGCTGCA
GGAGTTTAATCTGCATGCGCATCTCTTTCTTGTGACCAGTTTGATCAGTGACGGACCGGTCCGTATTCCTGCAGGCGAAC
CGGTGTACTCTCATGATGAGTGTCAAATGCTGGTTAAACAAGGCCGGGCTGATGAGGTCATGCTGCGCTGGTCAGAGGTC
CGGGAGATGCACCTCAGTGGCCTTGTTGAGTTTCACTCGCACACGCACACCCACCGACGCTGGGACCAGAAGCCTGTGTC
CCGTAATCCGTCGGATTTGCTTCGTGTCGATATTCTTCTTAGTCGTAAGCGGATGAGGGAGATGCTGGGTTATTGCAGTC
AGCATCTGTGCTGGCCTGAGGGCTGGTATTGTTCTGACTATATTCATGTGGCTGAAGAGTTGGGGTTCACATACCTGTAT
ACCACAGAAAGGCGTATGAACAATCCAGTCATCGGTTCACAGCGTATTGGTCGTATCAACGCAAAGGAGCGAAAGAATGT
GGGCTGGCTGAAACGTCGTCTGTTTTATCACACCACGCCCGGATTTTCTTCGCTGCTGGCCCGGCATAAGGGGGCACGTC
GGATAGCTGACTGA

Protein sequence : 
MFRGLFLVPSGVKIIYFLHKGIKHMSYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGA
RLPRKSVMLTFDGGWLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVMLRWSEV
REMHLSGLVEFHSHTHTHRRWDQKPVSRNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLY
TTERRMNNPVIGSQRIGRINAKERKNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0338 NP_454909.1 conserved hypothetical protein Not tested SPI-6 Protein 3e-129 99
shf AAL08449.1 putative protein Shf Not tested SRL Protein 3e-69 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybeJ YP_005241249.1 putative xylanase/chitin deacetylase VFG1040 Protein 2e-69 64