Gene Information

Name : O3M_21970 (O3M_21970)
Accession : YP_006772011.1
Strain : Escherichia coli 2009EL-2050
Genome accession: NC_018650
Putative virulence/resistance : Virulence
Product : polysaccharide deacetylase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4538564 - 4539385 bp
Length : 822 bp
Strand : +
Note : COG0726 Predicted xylanase/chitin deacetylase

DNA sequence :
TTGTTTAAAGCAAATCATGTTCCGGTATTAATGTATCATCATGTCAGCCATTGCCCAGGACTGGTTACACTTTCTCCCGA
GACATTCCGGAAACAAATGAAATGGTTGGCTGAAAACAACTGGAAAACACTGTCATCAGATGAACTGGAGTTTTTTTATC
GGGGCGGAAAACTTCCCCGTAAAAGCGTTATGTTGACATTTGATGATGGATACCTTGACAACTGGTTTCAGGTATATCCT
TTATTAAACGAGTTTAATCTCAAGGCACATATTTTTTTAATTACCAGTTTTATTGGAAATGGTCCGGTTCGTCACTCTCC
TGGAAAGGAATATTCTCATCGCGATTGCGAACATCAAATAGCAACCGGGAATGCTGATAATGTTATGCTTCGCTGGTCTG
AAGTGAACGAAATGTTGCAATCTGGTCTGGTCGAATTTCATGTTCATACACATACTCATACACGTTGGGATAAAAAGTTC
ACTTCACGAGAAGAACAGTGTAAACATCTTCGGCAGGACTTATTGAGCGGGAGAGAATATTTAAAAAAAATGACAGGAAA
ATGCAGTAAACATTTGTGTTGGCCGGAAGGTTATTATAACAAGGATTATATTCAGATCGCTGAAGAACTTGGATTCCATT
ATTTATATACAACAGAAAGAAGAATGAATGCTCCTGCTAAAGGAACTACACGGATAGGAAGAATAAGCACCAAGGAACGG
GAAAATTGCGTATGGCTGAAAAGACGACTTTTTTATTATACAACACCGTTTTTTTCATCGTTGCTGGCCCTTCATAAGGG
GCCAAGATTACCGGATGACTAA

Protein sequence :
MFKANHVPVLMYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDGYLDNWFQVYP
LLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKF
TSREEQCKHLRQDLLSGREYLKKMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKER
ENCVWLKRRLFYYTTPFFSSLLALHKGPRLPDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
shf AAL08449.1 putative protein Shf Not tested SRL Protein 8e-108 94
STY0338 NP_454909.1 conserved hypothetical protein Not tested SPI-6 Protein 5e-82 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_21970 YP_006772011.1 polysaccharide deacetylase family protein VFG1040 Protein 5e-108 94