Gene Information

Name : TY21A_12975 (TY21A_12975)
Accession : YP_007926850.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2633249 - 2634070 bp
Length : 822 bp
Strand : -
Note : COG0726 Predicted xylanase/chitin deacetylase

DNA sequence :
ATGTCTTATGCACGACATTTACCGGTATTAATGTATCACCATGTCAGTGATAAACCCGGACAGATAACCTTATCTCCCCG
TACGTTCCGGGCGCAGATGAAATGGCTGGCTGAATCTGGCTGGAAAACCGTTACTGCTGCAGCGGTGGAAGCTTTTTATC
ATGGTGCAAGATTGCCTCGTAAAAGCGTCATGCTGACTTTTGATGGCGGCTGGCTGGATAACTGGTTGCAGGTTTTTCCG
GTGCTGCAGGAGTTTAATCTGCATGCGCATCTCTTTCTTGTGACCAGTTTGATCAGTGACGGACCGGTTCGTATTCCTGC
AGGCGAACCGGTGTACTCTCATGATGAGTGTCAGATGCTGGTTAAACAAGGCCGGGTTGATGAGGTCATGCTGCGCTGGT
CAGAGGTCCGGGAGATGCACCTCAGTGGCCTTGTTGAGTTTCATTCGCACACGCACACCCACCGACGCTGGGACCAGAAG
CCTGTGTCCCGTAATCCGTCGGATTTGCTTCGTGTCGATATTCTTCTTAGTCGTAAGCGGATGAGGGAGATGCTGGGTTA
CTGCAGTCAGCATCTGTGCTGGCCTGAGGGCTGGTATTGTTCTGATTATATTCATGTGGCTGAAGAGCTGGGGTTCACAT
ACCTGTATACCACAGAAAGGCGTATGAACAATCCAGTCATCGGTTCACAGCGTATTGGTCGTATCAACACAAAGGAGCGA
AAGAATGTGGGCTGGCTGAAACGTCGCCTGTTTTATCACACCACGCCCGGATTTTCTTCGCTGCTGGCCCGGCATAAGGG
GGCACGTCGGATAGCTGACTGA

Protein sequence :
MSYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAAVEAFYHGARLPRKSVMLTFDGGWLDNWLQVFP
VLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRVDEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQK
PVSRNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTKER
KNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0338 NP_454909.1 conserved hypothetical protein Not tested SPI-6 Protein 5e-130 100
shf AAL08449.1 putative protein Shf Not tested SRL Protein 3e-69 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_12975 YP_007926850.1 hypothetical protein VFG1040 Protein 2e-69 63