Gene Information

Name : CFSAN001921_15880 (CFSAN001921_15880)
Accession : YP_008256522.1
Strain : Salmonella enterica CFSAN001921
Genome accession: NC_021814
Putative virulence/resistance : Virulence
Product : carbohydrate transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3219072 - 3219893 bp
Length : 822 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGTCTTATGCACGACATTTACCGGTATTAATGTATCACCATGTCAGTGATAAACCCGGACAGATAACCTTATCTCCCCG
TACGTTCCGGGCGCAGATGAAATGGCTGGCCGAATCTGGCTGGAAAACCGTTACTGCTGCAGAGGTGGAAGCTTTTTATC
ATGGTGCAAGATTGCCTCGTAAAAGCGTCATGCTGACCTTTGATGGCGGCTGGCTGGATAACTGGTTGCAGGTTTTTCCG
GTGCTGCAGGAGTTTAATCTGCATGCGCATCTCTTTCTTGTGACCAGTTTGATCAGTGACGGACCGGTCCGTATTCCTGC
AGGCGAACCGGTGTACTCTCATGATGAGTGTCAAATGCTGGTTAAACAAGGCCGGGCTGATGAGGTCATGCTGCGCTGGT
CAGAGGTCCGGGAGATGCACCTCAGTGGCCTTGTTGAGTTTCACTCGCACACGCACACCCACCGACGCTGGGACCAGAAG
CCTGTGTCCCGTAATCCGTCGGATTTGCTTCGTGTCGATATTCTTCTTAGTCGTAAGCGGATGAGGGAGATGCTGGGTTA
TTGCAGTCAGCATCTGTGCTGGCCTGAGGGCTGGTATTGTTCTGACTATATTCATGTGGCTGAAGAGTTGGGGTTCACAT
ACCTGTATACCACAGAAAGGCGTATGAACAATCCAGTCATCGGTTCACAGCGTATTGGTCGTATCAACGCAAAGGAGCGA
AAGAATGTGGGCTGGCTGAAACGTCGTCTGTTTTATCACACCACGCCCGGATTTTCTTCGCTGCTGGCCCGGCATAAGGG
GGCACGTCGGATAGCTGACTGA

Protein sequence : 
MSYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGGWLDNWLQVFP
VLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQK
PVSRNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAKER
KNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0338 NP_454909.1 conserved hypothetical protein Not tested SPI-6 Protein 3e-129 99
shf AAL08449.1 putative protein Shf Not tested SRL Protein 1e-69 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001921_15880 YP_008256522.1 carbohydrate transporter VFG1040 Protein 8e-70 64