Gene Information

Name : SEEB0189_17825 (SEEB0189_17825)
Accession : YP_008309856.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : carbohydrate transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3642120 - 3642941 bp
Length : 822 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGTCTTATGCACGACATTTACCGGTATTAATGTATCACCATGTCAGTGATAAACCCGGACAGATAACCTTATCTCCCTG
TACGTTCCGGGCGCAGATGAAATGGCTGGCTGAATCTGGCTGGAAAACCGTTACCGCTGCAGAGGTGGAAGCTTTTTATC
ATGGTGCAAGATTGCCTCGTAAAAGCGTCATGCTGACCTTTGATGGCGGCTGGCTGGATAACTGGTTGCAGGTTTTTCCG
GTGCTGCAGGAGTTTAATCTGCATGCGCATCTCTTTCTTGTGACCAGTTTGATCAGTGACGGACCGGTCCGTATTCCTGC
AGGCGAACCGGTGTACTCTCATGATGAGTGTCAGATGCTGGTTAAACAAGGCCGGGCTGATGAGGTCATGCTGCGCTGGT
CAGAGGTCCGGGAGATGCACCTCAGTGGCCTTGTTGAGTTTCACTCGCACACGCACACCCACCGACGCTGGGACCAGAAA
CCTGTGTCCCGTAATCCGTCGGATTTGCTTCGTGTCGATATTCTTCTTAGTCGTAAGCGGATGAGGGAGATGCTGGGTTA
CTGCAGTCAGCATCTGTGCTGGCCTGAGGGCTGGTATTGTTCTGACTATATTCATGTGGCTGAAGAGCTGGGGTTCACAT
ACCTGTATACCACAGAAAGGCGTATGAACAATCCAGTCATCGGTTCACAGCGTATTGGTCGTATCAACACAAAGGAGCGA
AAGAATGTGGGCTGGCTGAAACGTCGTCTGTTTTATCACACCACGCCCGGATTTTCTTCGCTGCTGGCCCGGCATAAGGG
GCCACGTCGGATAGCTGACTGA

Protein sequence : 
MSYARHLPVLMYHHVSDKPGQITLSPCTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGGWLDNWLQVFP
VLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQK
PVSRNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTKER
KNVGWLKRRLFYHTTPGFSSLLARHKGPRRIAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0338 NP_454909.1 conserved hypothetical protein Not tested SPI-6 Protein 3e-128 99
shf AAL08449.1 putative protein Shf Not tested SRL Protein 6e-69 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_17825 YP_008309856.1 carbohydrate transporter VFG1040 Protein 3e-69 64