Gene Information

Name : SN31241_13000 (SN31241_13000)
Accession : YP_008359217.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Shf
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1338000 - 1338893 bp
Length : 894 bp
Strand : +
Note : Shf of Enterobacteriaceae UniRef RepID=Q9X692_ECOLX

DNA sequence :
ATGTTTAGGGGGCTTTTTCTTGTCCCCTCAGGCGTAAAAATAATTTATTTTTTACATAAAGGAATAAAGCATATGTCTTA
TGCACGACATTTACCGGTATTAATGTATCACCATGTCAGTGATAAACCCGGACAGATAACCTTATCTCCCTGTACGTTCC
GGGCGCAGATGAAATGGCTGGCTGAATCTGGCTGGAAAACCGTTACCGCTGCAGAGGTGGAAGCTTTTTATCATGGTGCA
AGATTGCCTCGTAAAAGCGTCATGCTGACCTTTGATGGCGGCTGGCTGGATAACTGGTTGCAGGTTTTTCCGGTGCTGCA
GGAGTTTAATCTGCATGCGCATCTCTTTCTTGTGACCAGTTTGATCAGTGACGGACCGGTCCGTATTCCTGCAGGCGAAC
CGGTGTACTCTCATGATGAGTGTCAGATGCTGGTTAAACAAGGCCGGGCTGATGAGGTCATGCTGCGCTGGTCAGAGGTC
CGGGAGATGCACCTCAGTGGCCTTGTTGAGTTTCACTCGCACACGCACACCCACCGACGCTGGGACCAGAAACCTGTGTC
CCGTAATCCGTCGGATTTGCTTCGTGTCGATATTCTTCTTAGTCGTAAGCGGATGAGGGAGATGCTGGGTTATTGCAGTC
AGCATCTGTGCTGGCCTGAGGGCTGGTATTGTTCTGACTATATTCATGTGGCTGAAGAGCTGGGGTTCACATACCTGTAT
ACCACAGAAAGGCGTATGAACAATCCAGTCATCGGTTCACAGCGTATTGGTCGTATCAACACAAAGGAGCGAAAGAATGT
GGGCTGGCTGAAACGTCGTCTGTTTTATCACACCACGCCCGGATTTTCTTCGCTGCTGGCCCGGCATAAGGGGGCACGTC
GGATAGCTGACTGA

Protein sequence :
MFRGLFLVPSGVKIIYFLHKGIKHMSYARHLPVLMYHHVSDKPGQITLSPCTFRAQMKWLAESGWKTVTAAEVEAFYHGA
RLPRKSVMLTFDGGWLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVMLRWSEV
REMHLSGLVEFHSHTHTHRRWDQKPVSRNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLY
TTERRMNNPVIGSQRIGRINTKERKNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0338 NP_454909.1 conserved hypothetical protein Not tested SPI-6 Protein 4e-128 99
shf AAL08449.1 putative protein Shf Not tested SRL Protein 1e-68 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_13000 YP_008359217.1 Shf VFG1040 Protein 6e-69 64